The detailed information of tRNA gene sequence


Sequence ID>WENV170977115
Genome IDMTKZ01017029
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 15296
End posion on genome 15373
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
atcatgcttt
tRNA gene sequence 
GGGCGCATAGCTCAGTTGGTTAGAGCGCTTGTATCACACACAAGAGGTCCGGGGGTTCGA
GTCCCTTTGCGCCCACTA
Downstream region at tRNA end position 
atagaacgcg
Secondary structure (Cloverleaf model)
>WENV170977115	Val	CAC
                   t      ACTA atagaacgcg
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     A - T          T G
                    T     T T C C C     A
      T G A        A      + + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTCC
                    C - G
                    T - A
                    T - A
                    G - C
                    T - A
                  A       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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