The detailed information of tRNA gene sequence


Sequence ID>WENV170977127
Genome IDMTKZ01017223
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2063
End posion on genome 2160
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
tgggccatac
tRNA gene sequence 
GGAGCGGCTCGTGGTCCGGTGACCACCGCGGTCTTCAAAACCGTCTGCGGGGCGGTGATC
CCGTCCTGGGTGGGTTCGACTCCCATGTCGCTCCGCCA
Downstream region at tRNA end position 
ctgcgttttg
Secondary structure (Cloverleaf model)
>WENV170977127	SeC(p)	TCA
                   c      GCCA ctgcgttttg
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     G - C
                     G + T
                     C - G          T C
                    T     T A C C C     A
      C C T        C      + | | | |     G
    G       G G T G       G T G G G     C
    G       | | | |                 T T
    T       C C A C
      G A          C     CTGCGGGGCGGTGATCCCGTCCTGG
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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