The detailed information of tRNA gene sequence


Sequence ID>WENV170977144
Genome IDMTKZ01017571
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 9100
End posion on genome 9024
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ataatatcgt
tRNA gene sequence 
GGGCTCGTAGCTCAGTCGGTTAGAGCGTTGCATTCACATTGCAAAGGTCTCAGGTTCGAA
TCCTGACGGGCCCACCA
Downstream region at tRNA end position 
attaacgatt
Secondary structure (Cloverleaf model)
>WENV170977144	Val	CAC
                   t      ACCA attaacgatt
                     G - C
                     G - C
                     G - C
                     C - G
                     T + G
                     C - G
                     G - C          T A
                    T     A G T C C     A
      T G A        A      | | | | |     G
    C       C T C G       T C A G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        G     AGGTC
                    T - A
                    T - A
                    G - C
                    C - G
                    A - T
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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