The detailed information of tRNA gene sequence


Sequence ID>WENV170977155
Genome IDMTKZ01017728
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 74
End posion on genome 161
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ccattttaaa
tRNA gene sequence 
GCCGAGGTAGTCTAGCTCGGGAAGGCGGCGGTCTCGAAAACCGCTGGTGCTCGCCACCAC
AAGGGTTCAAATCCCTTCCTCGGCGCCA
Downstream region at tRNA end position 
tttaatttta
Secondary structure (Cloverleaf model)
>WENV170977155	Ser	CGA
                   a      GCCA tttaatttta
                     G - C
                     C - G
                     C - G
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     T T C C C     A
      C G A        A      | | | | |     A
    T       T C T G       A A G G G     C
    C       | | + |                 T T
    G       A G G C
      G G A        G     TGGTGCTCGCCACCAC
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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