The detailed information of tRNA gene sequence


Sequence ID>WENV170977174
Genome IDMTKZ01018229
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1121
End posion on genome 1210
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
cgaataattt
tRNA gene sequence 
GGGGAGGTGCCAGAGTGGACGATTGGGGCCGCCTGCTAAGTGGTTGTCGGGTAAAACCGA
CCCGGGGTTCGAATCCCCGCCTCTCCGCCT
Downstream region at tRNA end position 
taacaagacc
Secondary structure (Cloverleaf model)
>WENV170977174	Ser	GCT
                   t      GCCT taacaagacc
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     G C C C C     A
      T G A        G      | | | | |     G
    G       G A C C       C G G G G     C
    G       + | | |                 T T
    A       T T G G
      C G A        G     TGTCGGGTAAAACCGACC
                    G + T
                    C - G
                    C - G
                    G + T
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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