The detailed information of tRNA gene sequence


Sequence ID>WENV170977180
Genome IDMTKZ01018288
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5062
End posion on genome 5153
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gctgaattca
tRNA gene sequence 
GGAGAGATGGCAGAGTGGTCGAATGCGGCGGTCTCGAAAACCGTTGTCCTGCAATCGCGG
GACCGGGGGTTCGAATCCCCCTCTCTCCGCAA
Downstream region at tRNA end position 
aaacggatta
Secondary structure (Cloverleaf model)
>WENV170977180	Ser	CGA
                   a      GCAA aaacggatta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGTCCTGCAATCGCGGGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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