The detailed information of tRNA gene sequence


Sequence ID>WENV170977181
Genome IDMTKZ01018288
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 13532
End posion on genome 13443
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
nnnnnnnnnn
tRNA gene sequence 
GGAGAGATGGGTGAGTGGCTTAAACCAGCAGTTTGCTAAACTGCCGTATGGGTAACTGTA
CCGGGGGTTCGAATCCCCCTCTCTCCGCGA
Downstream region at tRNA end position 
agacggatta
Secondary structure (Cloverleaf model)
>WENV170977181	Ser	GCT
                   n      GCGA agacggatta
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G T G G       G G G G G     C
    G         | | |                 T T
    C       A A C C
      T T A        A     CGTATGGGTAACTGTACC
                    G - C
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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