The detailed information of tRNA gene sequence


Sequence ID>WENV170977185
Genome IDMTKZ01018351
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 571
End posion on genome 656
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
aaatataaag
tRNA gene sequence 
GGAGGATTAGTCCTAATCGGTAAGGCAGCGGTCTTGAAAACCGCCGGGTTATGCCCTTGG
GGGTTCGAATCCCTCATCCTCCGCCA
Downstream region at tRNA end position 
gaaaataaaa
Secondary structure (Cloverleaf model)
>WENV170977185	Ser	TGA
                   g      GCCA gaaaataaaa
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    T       C C T G       G G G G G     C
    C         | + |                 T T
    G       A G G C
      G T A        A     CGGGTTATGCCCTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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