The detailed information of tRNA gene sequence


Sequence ID>WENV170977190
Genome IDMTKZ01018366
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 11859
End posion on genome 11784
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
tttcggaagt
tRNA gene sequence 
GGGGCTGTAGCTCAGTTGGTAGAGCGGTAGCTTTGCAAGCTATAGGTCAGGAGTTCGAAT
CTCCTCAGCTCCACCA
Downstream region at tRNA end position 
attttcatgg
Secondary structure (Cloverleaf model)
>WENV170977190	Ala	TGC
                   t      ACCA attttcatgg
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     G - C          T A
                    T     T C C T C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGTC
                    G + T
                    T - A
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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