The detailed information of tRNA gene sequence


Sequence ID>WENV170977202
Genome IDMTKZ01018455
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3875
End posion on genome 3949
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aacaaaacac
tRNA gene sequence 
GGGCGGTTAACTCAGCGGGAGAGTGCTACCTTCACACGGTAGAAGTCGCTGGTTCAATCC
CAGCACCGCCTACCA
Downstream region at tRNA end position 
tttgaattca
Secondary structure (Cloverleaf model)
>WENV170977202	Val	CAC
                   c      ACCA tttgaattca
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C
                     T - A          C T
                    T     C G A C C     A
        G A        A      | | | | |     A
      C     C T C A       G C T G G     C
      G     | | | |                 T T
      G     G A G T
        G A        G     AAGTC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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