The detailed information of tRNA gene sequence


Sequence ID>WENV170977206
Genome IDMTKZ01018548
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2507
End posion on genome 2596
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
caaccatcac
tRNA gene sequence 
AGAGAGATGGCAGAGTGGTTGAATGCGGCGGTCTTGAAAACCGTTGAAGCGGCAACGTTT
CCGGGGGTTCGAATCCCTCTCTCTCTGCAA
Downstream region at tRNA end position 
aagaccttta
Secondary structure (Cloverleaf model)
>WENV170977206	Ser	TGA
                   c      GCAA aagaccttta
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
      T G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      T G A        G     TGAAGCGGCAACGTTTCC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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