The detailed information of tRNA gene sequence


Sequence ID>WENV170977215
Genome IDMTKZ01018769
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4067
End posion on genome 4153
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acaactcttt
tRNA gene sequence 
GGAGGGTTGGCCGAGTGGTTTATGGCGCCAGTTTTGAAAACTGGTGGGCGAAAGCCCTCA
TGGGTTCGAATCCTATACCCTCCGCCA
Downstream region at tRNA end position 
gttaggaaat
Secondary structure (Cloverleaf model)
>WENV170977215	Ser	TGA
                   t      GCCA gttaggaaat
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     T A T C C     A
      T G A        G      | | + | |     G
    G       G C C G       A T G G G     C
    G       + | | |                 T T
    T       T G G C
      T T A        G     TGGGCGAAAGCCCTC
                    C - G
                    C - G
                    A - T
                    G - C
                    T - A
                  T       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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