The detailed information of tRNA gene sequence


Sequence ID>WENV170977220
Genome IDMTKZ01018832
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 37275
End posion on genome 37365
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
tcttaggtat
tRNA gene sequence 
GGAGGGATACCGAAGTGGTTATAACGGGCTGGTCTCGAAAACCAAGCGTCACGAAAGTGA
CACGAGGGTTCGAATCCCTCTCCCTCCGCCA
Downstream region at tRNA end position 
tgaggaattg
Secondary structure (Cloverleaf model)
>WENV170977220	Ser	CGA
                   t      GCCA tgaggaattg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     A - T          T A
                    T     C T C C C     A
    G T G A        A      | | | | |     G
  G         A G C C       G A G G G     C
  T           | | |                 T T
  T         A C G G
    A T A          G     GCGTCACGAAAGTGACAC
                    C   A
                    T - A
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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