The detailed information of tRNA gene sequence


Sequence ID>WENV170977245
Genome IDMTKZ01019550
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 139
End posion on genome 221
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
taaaaacttg
tRNA gene sequence 
GGAGGATTCGCCTAATGGTATGGCACCCCGTTCGAAGCGGGACGCCCGCAAGGGCTTGGG
GGTTCGACTCCCTCATCCTCCGCac
Downstream region at tRNA end position 
ttcgacaagc
Secondary structure (Cloverleaf model)
>WENV170977245	Ser	CGA
                   g      GCac ttcgacaagc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T C
                    T     C T C C C     A
        A A        C      | + | | |     G
      T     T C C G       G G G G G     C
      G       | | |                 T T
      G     T G G C
        T A        A     CGCCCGCAAGGGCTT
                    C   A
                    C - G
                    C - G
                    C - G
                    G - C
                  T       G
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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