The detailed information of tRNA gene sequence


Sequence ID>WENV170977247
Genome IDMTKZ01019583
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 12446
End posion on genome 12539
Amino Acid Gly
Anticodon CCC
Upstream region at tRNA start position 
gattcacgct
tRNA gene sequence 
GCGGGAGTAATTCAGCGGTAGAATGTCAGCTTCCCAAGCTGAACGTCGCGGGTTCNNGGT
AACGTCGCGGGTTCGATCCCCGTCTCCCGCTCCA
Downstream region at tRNA end position 
ttttggttcg
Secondary structure (Cloverleaf model)
>WENV170977247	Gly	CCC
                   t      TCCA ttttggttcg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          C T
                    T     T G C C C     A
        G A        A      + | | | |     G
      C     C T T A       G C G G G     C
      G     | | | |                 T T
      G     G A A T
        T A        G     ACGTCGCGGGTTCNNGGTAACGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    C - G
                  T       A
                  T       A
                    C C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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