The detailed information of tRNA gene sequence


Sequence ID>WENV170977261
Genome IDMTKZ01019925
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 7784
End posion on genome 7694
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gccgtttttc
tRNA gene sequence 
GGAGAGATGCAGGAGTGGTTGAACTGGCTCGCCTGGAAAGCTAGTATACCCCTAAAGGGT
ATCGGGGGTTCGAATCCCCCTCTCTCCGCAA
Downstream region at tRNA end position 
agtacatgaa
Secondary structure (Cloverleaf model)
>WENV170977261	Ser	GGA
                   c      GCAA agtacatgaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      T G A        G      | | | | |     G
    G       G G A C       G G G G G     C
    G         | | |                 T T
    T       A C T G
      T G A        G     TATACCCCTAAAGGGTATC
                    C - G
                    T - A
                    C   T
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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