The detailed information of tRNA gene sequence


Sequence ID>WENV170977264
Genome IDMTKZ01020057
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2485
End posion on genome 2577
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
gctaaaacct
tRNA gene sequence 
GGGAATGCACGGTAGCCTGGTGGCGCCCGCGGACTTCAAATCCGTTGTGAGGCGGTAACG
TCTCGGGTGGGTTCGATTCCCACACATTCCCGCta
Downstream region at tRNA end position 
aaaaaacgcc
Secondary structure (Cloverleaf model)
>WENV170977264	SeC(p)	TCA
                   t      GCta aaaaaacgcc
                     G - C
                     G - C
                     G - C
                     A - T
                     A - T
                     T - A
                     G - C
                     C   A          T T
                    A     C A C C C     A
      C C G        C      | | | | |     G
    T       A T G G       G T G G G     C
    G         + | |                 T T
    G       C G C C
      T G G        C     TGTGAGGCGGTAACGTCTCGG
                    G + T
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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