The detailed information of tRNA gene sequence


Sequence ID>WENV170977269
Genome IDMTKZ01020155
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 727
End posion on genome 653
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
tccccttgtt
tRNA gene sequence 
CGGGGTGTGGCGCAGTCTGGTAGCGCGCTTCGTTCGGGTCGAAGAGGTCGCCGGTTCGAG
TCCGGCCACCCCGACag
Downstream region at tRNA end position 
caatagcgcc
Secondary structure (Cloverleaf model)
>WENV170977269	Pro	CGG
                   t      ACag caatagcgcc
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T G
                    T     C G G C C     A
      T G A        G      | | | | |     G
    C       C G C G       G C C G G     C
    T       | | | |                 T T
    G       G C G C
      G T A        G     AGGTC
                    C - G
                    T - A
                    T - A
                    C - G
                    G - C
                  T       T
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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