The detailed information of tRNA gene sequence


Sequence ID>WENV170977278
Genome IDMTKZ01020219
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 872
End posion on genome 963
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
attattttat
tRNA gene sequence 
GGAGAAATGGCAGAGCGGTCGAATGCGGCGGTCTTGAAAACCGTTGTCCGCCTATCGGTG
GACCGGGGGTTCGAATCCCTCTTTCTCCGCCA
Downstream region at tRNA end position 
aagccatcag
Secondary structure (Cloverleaf model)
>WENV170977278	Ser	TGA
                   t      GCCA aagccatcag
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     A - T
                     A - T          T A
                    T     C T C C C     A
      C G A        G      | + | | |     G
    G       G A C G       G G G G G     C
    G         | | |                 T T
    T       A T G C
      C G A        G     TGTCCGCCTATCGGTGGACC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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