The detailed information of tRNA gene sequence


Sequence ID>WENV170977293
Genome IDMTKZ01020332
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 24793
End posion on genome 24718
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gatatgttgc
tRNA gene sequence 
AGGACAGTAGTTCAACTGGTAGAGCACCGGTCTCCAAAACCGGGGGTTGCGGGTTCGATT
CCTGCCTGTCCTGCCA
Downstream region at tRNA end position 
catcacagcc
Secondary structure (Cloverleaf model)
>WENV170977293	Trp	CCA
                   c      GCCA catcacagcc
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C          T T
                    T     C G T C C     A
      C A A        A      | | + | |     G
    T       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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