The detailed information of tRNA gene sequence


Sequence ID>WENV170977314
Genome IDMTKZ01020884
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5898
End posion on genome 5973
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
gaagtgcgtt
tRNA gene sequence 
GGGGCTATAGCTCAGTTGGTAGAGCGAATGGTTCGCAATCATTAGGCCAGGGGTTCGAAT
CCCCTTAGCTCCACCA
Downstream region at tRNA end position 
ccattcattt
Secondary structure (Cloverleaf model)
>WENV170977314	Ala	CGC
                   t      ACCA ccattcattt
                     G - C
                     G - C
                     G + T
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     T C C C C     A
      T G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCC
                    A - T
                    A - T
                    T - A
                    G - C
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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