The detailed information of tRNA gene sequence


Sequence ID>WENV170977335
Genome IDMTKZ01021287
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3366
End posion on genome 3439
Amino Acid Ala
Anticodon TGC
Upstream region at tRNA start position 
gccctttacc
tRNA gene sequence 
GGGGATGTAGCTTAGCTGGGAGAGCGCCGCCTTTGCACGGCGGAGGTCAGGGGTTCGAAT
CCCCTCATCTCCACtc
Downstream region at tRNA end position 
ttagcgacct
Secondary structure (Cloverleaf model)
>WENV170977335	Ala	TGC
                   c      ACtc ttagcgacct
                     G - C
                     G - C
                     G + T
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       T T C G       A G G G G     C
    G       + | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       C
                  T       A
                    T G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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