The detailed information of tRNA gene sequence


Sequence ID>WENV170977341
Genome IDMTKZ01021485
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5989
End posion on genome 5915
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
tcagacaacT
tRNA gene sequence 
GGGGACGTAGTGTAGTGGTTAACATGTCGGCCTGTCAAGCCGAAGATCGCGGGTTCGAAC
CCCGTCGTCCCCGTag
Downstream region at tRNA end position 
ctggtatatc
Secondary structure (Cloverleaf model)
>WENV170977341	Asp	GTC
                   T      GTag ctggtatatc
                     G - C
                     G - C
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C          C A
                    T     T G C C C     A
      T G A        A      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    T       A C A T
      T A          G     AGATC
                    T - A
                    C - G
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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