The detailed information of tRNA gene sequence


Sequence ID>WENV170977342
Genome IDMTKZ01021554
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 22184
End posion on genome 22259
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gattcgtgaa
tRNA gene sequence 
CGGGGAGTAGCGCAGATGGAAGCGCGCCTGTCTTGGGCACAGGAGGTCGCAGGTTCAAAT
CCTGTCTTCCCGACCA
Downstream region at tRNA end position 
agctgtatgt
Secondary structure (Cloverleaf model)
>WENV170977342	Pro	TGG
                   a      ACCA agctgtatgt
                     C - G
                     G - C
                     G - C
                     G - C
                     G + T
                     A - T
                     G - C          T A
                    T     T G T C C     A
      A G A        A      + | | | |     A
    T       C G C G       G C A G G     C
    G       | | | |                 T T
    G       G C G C
      A A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    T - A
                  C       C
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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