The detailed information of tRNA gene sequence


Sequence ID>WENV170977347
Genome IDMTKZ01021554
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 25336
End posion on genome 25248
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
atacggtaat
tRNA gene sequence 
GGAGGCGTATCCTAATTGGCTAAGGAGCCGGTCTCGAAAATCGGTGGGGTTGACGCCCCT
TGTGGGTTCGAGTCCCACCGCCTCCGCCA
Downstream region at tRNA end position 
gtgcgactca
Secondary structure (Cloverleaf model)
>WENV170977347	Ser	CGA
                   t      GCCA gtgcgactca
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     C A C C C     A
      T A A        A      | | | | |     G
    T       T C C T       G T G G G     C
    G       | | | |                 T T
    G       A G G A
      C T A        G     TGGGGTTGACGCCCCTT
                    C - G
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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