The detailed information of tRNA gene sequence


Sequence ID>WENV170977365
Genome IDMTKZ01021859
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 28380
End posion on genome 28455
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tcgtttttgt
tRNA gene sequence 
AGGCGAGTAGCTCAATTGGCAGAGCGACGGTCTCCAAAATCGTAGGTCGGGGGTTCGAGG
CCCTCCTCGCCTGCCA
Downstream region at tRNA end position 
gaaaaagaga
Secondary structure (Cloverleaf model)
>WENV170977365	Trp	CCA
                   t      GCCA gaaaaagaga
                     A - T
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     G - C          G G
                    T     C T C C C     A
      T A A        A      | + | | |     G
    T       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      C A          G     AGGTC
                    A - T
                    C - G
                    G - C
                    G + T
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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