The detailed information of tRNA gene sequence


Sequence ID>WENV170977366
Genome IDMTKZ01021883
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1094
End posion on genome 1005
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
atcaattgct
tRNA gene sequence 
GGAGAGATGTCTGAGTGGTCGAAAGAGACGGTCTTGAAAACCGTTGTACAGGTTTCTGTA
CCGTGGGTTCGAATCCCACTCTCTCCGCCA
Downstream region at tRNA end position 
gtagtttaat
Secondary structure (Cloverleaf model)
>WENV170977366	Ser	TGA
                   t      GCCA gtagtttaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G T C T       G T G G G     C
    G         | | |                 T T
    T       A A G A
      C G A        G     TGTACAGGTTTCTGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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