The detailed information of tRNA gene sequence


Sequence ID>WENV170977377
Genome IDMTKZ01022048
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 2471
End posion on genome 2396
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
tgggccgcga
tRNA gene sequence 
AGGGCGGTGGCTCAAGTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCAGGTTCGAGT
CCTGTCCGCCCTGCCG
Downstream region at tRNA end position 
gtgccggcgt
Secondary structure (Cloverleaf model)
>WENV170977377	Trp	CCA
                   a      GCCG gtgccggcgt
                     A - T
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     G - C          T G
                    T     T G T C C     A
      G A A        G      + | | | |     G
    T       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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