The detailed information of tRNA gene sequence


Sequence ID>WENV170977390
Genome IDMTKZ01022312
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 102634
End posion on genome 102557
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
gcccgacgtc
tRNA gene sequence 
CGGGGCGTAGCGCAGCCTGGTTAGCGCGCCTGCTTCGGGAGCAGGAGGTCGGAGGTTCAA
ATCCTCTCGCCCCGACCA
Downstream region at tRNA end position 
gaagagggaa
Secondary structure (Cloverleaf model)
>WENV170977390	Pro	CGG
                   c      ACCA gaagagggaa
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T C T C C     A
    C C G A        A      + | | | |     A
  T         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AGGTC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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