The detailed information of tRNA gene sequence


Sequence ID>WENV170977408
Genome IDMTKZ01022621
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 327
End posion on genome 401
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
cacagtctac
tRNA gene sequence 
GGGCGCGTAGCTCAGTTGGTCAGAGCGCACGGTTCACATCCGTGAGGTCACTGGTTCGAG
CCCAGTCGTGCCCACtt
Downstream region at tRNA end position 
cggcggccgc
Secondary structure (Cloverleaf model)
>WENV170977408	Val	CAC
                   c      ACtt cggcggccgc
                     G - C
                     G - C
                     G - C
                     C - G
                     G + T
                     C - G
                     G - C          C G
                    T     T G A C C     A
      T G A        A      | | | | |     G
    T       C T C G       A C T G G     C
    G       | | | |                 T T
    G       G A G C
      T C A        G     AGGTC
                    C - G
                    A - T
                    C - G
                    G - C
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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