The detailed information of tRNA gene sequence


Sequence ID>WENV170977420
Genome IDMTKZ01022847
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6919
End posion on genome 7008
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
gaccaagcat
tRNA gene sequence 
GGAGAGGTAGCGCAGTCCGGCCTAACGCGCCCGCTTGGAAAGCGGGTATACCGCAAGGTA
TCGTGGGTTCGAATCCCACCCTCTCCGCCT
Downstream region at tRNA end position 
gatattattc
Secondary structure (Cloverleaf model)
>WENV170977420	Ser	GGA
                   t      GCCT gatattattc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    C T G A        A      | | | | |     G
  C         C G C G       G T G G G     C
  G           | | |                 T T
  G         A C G C
    C C T A        G     TATACCGCAAGGTATC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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