The detailed information of tRNA gene sequence


Sequence ID>WENV170977429
Genome IDMTKZ01023151
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6952
End posion on genome 6864
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
gcccgcatgt
tRNA gene sequence 
GCAGAGGTATCGAAGCGGTCATAACGGGGCTGACTCGAAATCAGTTTGGCTGAAAGGCCA
CGTGGGTTCGAATCCCACCCTCTGCGCCA
Downstream region at tRNA end position 
ccatcactac
Secondary structure (Cloverleaf model)
>WENV170977429	Ser	CGA
                   t      GCCA ccatcactac
                     G - C
                     C - G
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
    G C G A        A      | | | | |     G
  G         A G C T       G T G G G     C
  T           | | +                 T T
  C         A C G G
    A T A          G     TTGGCTGAAAGGCCAC
                    G + T
                    C - G
                    T - A
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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