The detailed information of tRNA gene sequence


Sequence ID>WENV170977437
Genome IDMTKZ01023378
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 174
End posion on genome 264
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttgtgtatct
tRNA gene sequence 
GGAAGGGTCGCATAGTTGGCCTAGTGCGCGCGCCTGGAAAGCGCGTAGGCGGGACCTCTC
GCCTCGCGGGTTCGAATCCCGCCCCTTCCGCac
Downstream region at tRNA end position 
cgaaacaccc
Secondary structure (Cloverleaf model)
>WENV170977437	Ser	GGA
                   t      GCac cgaaacaccc
                     G - C
                     G - C
                     A - T
                     A - T
                     G - C
                     G - C
                     G - C          T A
                    T     C G C C C     A
    T T G A        C      | | | | |     G
  G         T A C G       G C G G G     C
  G         + | | |                 T T
  C         G T G C
    C T A          G     TAGGCGGGACCTCTCGCCTC
                    C - G
                    G - C
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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