The detailed information of tRNA gene sequence


Sequence ID>WENV170977438
Genome IDMTKZ01023378
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 24249
End posion on genome 24173
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
ccgatatctT
tRNA gene sequence 
AGGGTCGTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAACCGCAGGTTGCGGGTTCGATT
CCTGCCGGCCCTGCCC
Downstream region at tRNA end position 
cttcctctct
Secondary structure (Cloverleaf model)
>WENV170977438	Trp	CCA
                   T      GCCC cttcctctct
                     A - T
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     G - C          T T
                    T     C G T C C     A
      T A A        A      | | + | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     AGGTT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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