The detailed information of tRNA gene sequence


Sequence ID>WENV170977442
Genome IDMTKZ01023476
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6448
End posion on genome 6363
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
acttaatcgt
tRNA gene sequence 
GGAGGATTAGTCCTAACTGGTAAGGCAGCGGTCTTGAAAACCGCCGGGTTCTGCCCATGG
GGGTTCGAATCCCTCATCCTCCGCCA
Downstream region at tRNA end position 
gaatatagcg
Secondary structure (Cloverleaf model)
>WENV170977442	Ser	TGA
                   t      GCCA gaatatagcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     T - A          T A
                    T     C T C C C     A
      A A T        A      | + | | |     G
    C       C C T G       G G G G G     C
    T         | + |                 T T
    G       A G G C
      G T A        A     CGGGTTCTGCCCAT
                    G - C
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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