The detailed information of tRNA gene sequence


Sequence ID>WENV170977443
Genome IDMTKZ01023476
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 6338
End posion on genome 6247
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
tcccttttgg
tRNA gene sequence 
GGAGAGGTGACCGAGCTGGCTGAAGGTGCACGCCTGCTAAGCGTGTGTGGGTCAAAAGCC
CACCGAGGGTTCGAATCCCTCCCTCTCCGCCA
Downstream region at tRNA end position 
gatacacaat
Secondary structure (Cloverleaf model)
>WENV170977443	Ser	GCT
                   g      GCCA gatacacaat
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
    T C G A        G      | | | | |     G
  G         G C C A       G A G G G     C
  G           | | |                 T T
  C         A G G T
    T G A          G     TGTGGGTCAAAAGCCCACC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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