The detailed information of tRNA gene sequence


Sequence ID>WENV170977453
Genome IDMTKZ01023764
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 264
End posion on genome 169
Amino Acid SeC
Anticodon TCA
Upstream region at tRNA start position 
tcacagtcgt
tRNA gene sequence 
GGAGGTGTCCGGGTACCTGGTGGGCCCCCCCGCCTTCAAAGCGGGTGGGACGGGCGATCC
CCGTCCGGCGGGTTCGATTCCCGTCCACCTCCGCCA
Downstream region at tRNA end position 
cacgcaatcg
Secondary structure (Cloverleaf model)
>WENV170977453	SeC	TCA
                   t      GCCA cacgcaatcg
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     T - A
                     G - C
                     T   C          T T
                    C     T G C C C     A
      C C A        C      + | | | |     G
    T       T G G G       G C G G G     C
    G       + | | |                 T T
    G       G C C C
      T G G        C     TGGGACGGGCGATCCCCGTCCG
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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