The detailed information of tRNA gene sequence


Sequence ID>WENV170977454
Genome IDMTKZ01023872
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 3600
End posion on genome 3512
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttgatttaag
tRNA gene sequence 
GGAGGAGTGCGAGAGTGGTTGAATCGGGCGCTCTCGAAAAGCGCTATGCCTATATGGCAT
CAAGGGTTCGAATCCCTTCTCCTCCGCTA
Downstream region at tRNA end position 
attatcactt
Secondary structure (Cloverleaf model)
>WENV170977454	Ser	CGA
                   g      GCTA attatcactt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     T T C C C     A
      T G A        G      | | | | |     G
    G       G A G C       A A G G G     C
    G         | | |                 T T
    T       A T C G
      T G A        G     TATGCCTATATGGCATC
                    G - C
                    C - G
                    G - C
                    C - G
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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