The detailed information of tRNA gene sequence


Sequence ID>WENV170977455
Genome IDMTKZ01023925
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1734
End posion on genome 1646
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
cttcctgttc
tRNA gene sequence 
GGAGAGATGCCGGAGCGGTTGAACGGGGCGGTCTCGAAAACCGTTATAGGTCTCGTACCT
ATCGTGGGTTCGAATCCCACTCTCTCCGCtg
Downstream region at tRNA end position 
atttctttaa
Secondary structure (Cloverleaf model)
>WENV170977455	Ser	CGA
                   c      GCtg atttctttaa
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C A C C C     A
      C G A        G      | | | | |     G
    G       G G C C       G T G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TATAGGTCTCGTACCTATC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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