The detailed information of tRNA gene sequence


Sequence ID>WENV170977461
Genome IDMTKZ01023949
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 4097
End posion on genome 4013
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttaaagttta
tRNA gene sequence 
GGAGGGTTGGCCGAGTGGTTTATGGCGCACGCCTCGAAAGCGTGTGGGCGAAAGTCCGCA
GAGGTTCAAATCCTCTACCCTCCGCag
Downstream region at tRNA end position 
attgaaactt
Secondary structure (Cloverleaf model)
>WENV170977461	Ser	CGA
                   a      GCag attgaaactt
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     G - C
                     T - A          T A
                    T     T C T C C     A
      T G A        G      | | | | |     A
    G       G C C G       A G A G G     C
    G       + | | |                 T T
    T       T G G C
      T T A        G     TGGGCGAAAGTCCGC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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