The detailed information of tRNA gene sequence


Sequence ID>WENV170977463
Genome IDMTKZ01023949
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 179
End posion on genome 93
Amino Acid Ser
Anticodon GGA
Upstream region at tRNA start position 
ttgtaaagtt
tRNA gene sequence 
GGAGGAGTCGCCTAGTGGTTTATGGCGCACGCCTGGAAAGCGTGTGTTCGAAAGGACTCG
TGGGTTCGAATCCCACCTCCTCCGCCA
Downstream region at tRNA end position 
agaaagtctc
Secondary structure (Cloverleaf model)
>WENV170977463	Ser	GGA
                   t      GCCA agaaagtctc
                     G - C
                     G - C
                     A - T
                     G - C
                     G - C
                     A - T
                     G - C          T A
                    T     C A C C C     A
      T G A        C      | | | | |     G
    G       T C C G       G T G G G     C
    G         | | |                 T T
    T       T G G C
      T T A        G     TGTTCGAAAGGACTC
                    C - G
                    A - T
                    C - G
                    G - C
                    C - G
                  C       A
                  T       A
                    G G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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