The detailed information of tRNA gene sequence


Sequence ID>WENV170977473
Genome IDMTKZ01024266
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 822
End posion on genome 749
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
acggcggcac
tRNA gene sequence 
CGGGGCGTAGCGTAGTGGCTAGCGCGCCTGCTTTGGGAGCAGGAGACCGCAGGTTCGAGT
CCTGTCGCCCCGACgc
Downstream region at tRNA end position 
caatgtgcct
Secondary structure (Cloverleaf model)
>WENV170977473	Pro	TGG
                   c      ACgc caatgtgcct
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T G
                    T     T G T C C     A
      T G A        A      + | | | |     G
    G       T G C G       G C A G G     C
    G       + | | |                 T T
    C       G C G C
      T A          G     AGACC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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