The detailed information of tRNA gene sequence


Sequence ID>WENV170977478
Genome IDMTKZ01024483
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 1156
End posion on genome 1250
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ggtaatcggt
tRNA gene sequence 
GGAGTGATGGCCGAGTGGCTGAAGGCGTCTGCCTGCTAAGCAGATAGGGTGGGCTAATCC
TGCCCTCGTGGGTTCAAATCCCACTCACTCCGCCA
Downstream region at tRNA end position 
ccataaccca
Secondary structure (Cloverleaf model)
>WENV170977478	Ser	GCT
                   t      GCCA ccataaccca
                     G - C
                     G - C
                     A - T
                     G - C
                     T - A
                     G - C
                     A - T          T A
                    T     C A C C C     A
      T G A        G      | | | | |     A
    G       G C C G       G T G G G     C
    G         | | |                 T T
    C       A G G C
      T G A        G     TAGGGTGGGCTAATCCTGCCCTC
                    T - A
                    C - G
                    T - A
                    G - C
                    C - G
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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