The detailed information of tRNA gene sequence


Sequence ID>WENV170977483
Genome IDMTKZ01024678
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 15365
End posion on genome 15438
Amino Acid Ala
Anticodon GGC
Upstream region at tRNA start position 
actctcgaag
tRNA gene sequence 
GGGCCCATAGCTCAGCTGGGAGAGCGCTTGAATGGCATTCAAGAGGTCAGGAGTTCGATT
CTCCTTGGGTCCACtt
Downstream region at tRNA end position 
cgcaattagg
Secondary structure (Cloverleaf model)
>WENV170977483	Ala	GGC
                   g      ACtt cgcaattagg
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     A - T          T T
                    T     T C C T C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G A G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       A
                    G G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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