The detailed information of tRNA gene sequence


Sequence ID>WENV170977485
Genome IDMTKZ01024723
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 11338
End posion on genome 11426
Amino Acid Ser
Anticodon TGA
Upstream region at tRNA start position 
tctacggctT
tRNA gene sequence 
GGAGAGGTGACAGAGTGGTCGAATGTGACGGTCTTGAAAACCGTTGTACGGGTTTCCGTA
CCGTGGGTTCGAATCCCACCCTCTCCGTtt
Downstream region at tRNA end position 
ttatttctca
Secondary structure (Cloverleaf model)
>WENV170977485	Ser	TGA
                   T      GTtt ttatttctca
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C A C C C     A
      T G A        G      | | | | |     G
    G       G A C A       G T G G G     C
    G         | | |                 T T
    T       A T G T
      C G A        G     TGTACGGGTTTCCGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    T G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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