The detailed information of tRNA gene sequence


Sequence ID>WENV170977502
Genome IDMTKZ01025073
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 230
End posion on genome 135
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
ttgtcgcgat
tRNA gene sequence 
GGAGAGATGGCTGAGTCCGGTTGAAAGCGCTCGACTCGAAATCGAGTAGGGGGTGTGAAA
TCTCCCTCGGGGGTTCGAATCCCTCTCTCTCCGCCA
Downstream region at tRNA end position 
gaattcaagc
Secondary structure (Cloverleaf model)
>WENV170977502	Ser	CGA
                   t      GCCA gaattcaagc
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  C         G T C G       G G G G G     C
  G           | | |                 T T
  G         A A G C
    T T G A        G     TAGGGGGTGTGAAATCTCCCTC
                    C - G
                    T - A
                    C - G
                    G - C
                    A - T
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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