The detailed information of tRNA gene sequence


Sequence ID>WENV170977504
Genome IDMTKZ01025118
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 897
End posion on genome 807
Amino Acid Ser
Anticodon CGA
Upstream region at tRNA start position 
aaaaataaac
tRNA gene sequence 
GGAGAGTTGCCGGAGTGGTTGAACGGGACGGTCTCGAAAACCGTTGTACCTATTAAAGGT
ACCCAGGGTTCGAATCCCTGACTCTCCGCCA
Downstream region at tRNA end position 
gttgcatttt
Secondary structure (Cloverleaf model)
>WENV170977504	Ser	CGA
                   c      GCCA gttgcatttt
                     G - C
                     G - C
                     A - T
                     G - C
                     A - T
                     G - C
                     T - A          T A
                    T     G T C C C     A
      T G A        G      | | | | |     G
    G       G G C C       C A G G G     C
    G         | | |                 T T
    T       A C G G
      T G A        G     TGTACCTATTAAAGGTACC
                    A - T
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C G A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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