The detailed information of tRNA gene sequence


Sequence ID>WENV170977506
Genome IDMTKZ01025166
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 12588
End posion on genome 12682
Amino Acid SeC(p)
Anticodon TCA
Upstream region at tRNA start position 
ttcagccctc
tRNA gene sequence 
GGGAGGGTGAGGCATCCGGTGATGTCTCCGGACTTCAAATCCGGTATGGGGCTATAAACG
TCCCGGATGGGTTCGACTCCCATACCTTCCCGCCA
Downstream region at tRNA end position 
ctccgccgat
Secondary structure (Cloverleaf model)
>WENV170977506	SeC(p)	TCA
                   c      GCCA ctccgccgat
                     G - C
                     G - C
                     G - C
                     A - T
                     G + T
                     G - C
                     G - C
                     T - A          T C
                    G     T A C C C     A
      C C T        A      | | | | |     G
    G       A C G G       A T G G G     C
    G       | | + |                 T T
    T       T G T C
      G A          T     TATGGGGCTATAAACGTCCCGG
                    C - G
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    T C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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