The detailed information of tRNA gene sequence


Sequence ID>WENV170977508
Genome IDMTKZ01025219
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 12853
End posion on genome 12781
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
accctcgttt
tRNA gene sequence 
GGTGACGTAGCTCAGTGGTAGAGCAGGGGACTCATAAGCCCTTGGTCACAAGTTCAAATC
TTGTCGTCACCACtt
Downstream region at tRNA end position 
aaccccgaaa
Secondary structure (Cloverleaf model)
>WENV170977508	Met	CAT
                   t      ACtt aaccccgaaa
                     G - C
                     G - C
                     T - A
                     G - C
                     A - T
                     C - G
                     G - C          T A
                    T     T G T T C     A
        G A        A      | | | | |     A
      T     C T C G       A C A A G     C
      G     | | | |                 T T
      G     G A G C
        T A        A     TGGTC
                    G + T
                    G - C
                    G - C
                    G - C
                    A   G
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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