The detailed information of tRNA gene sequence


Sequence ID>WENV170977511
Genome IDMTKZ01025237
Search identical group
Phylum/Class[MTKZ] anaerobic digester metagenome; anaerobic digester fed with sludge from wastewater treatment plant
Species
Start position on genome 5021
End posion on genome 4945
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
acatccatcg
tRNA gene sequence 
CGGGGCGTAGCTCAGCTTGGTAGAGCGCCCGCTTTGGGAGCGGGAGGTCGCAGGTTCAAA
TCCTGTCGCCCCGACAA
Downstream region at tRNA end position 
ctgtcgcccg
Secondary structure (Cloverleaf model)
>WENV170977511	Pro	TGG
                   g      ACAA ctgtcgcccg
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C          T A
                    T     T G T C C     A
      C G A        A      + | | | |     A
    T       C T C G       G C A G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     AGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    C - G
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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